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AI4Life’s Highlights at I2K 2024

AI4Life’s highlights at I2K 2024

by Beatriz Serrano-Solano

AI4Life played an important role at the 2024 Images to Knowledge (I2K) conference, held from October 23-25 at the Human Technopole in Milan. As a major event for experts at the intersection of life sciences and quantitative image analysis, I2K offered AI4Life partners an ideal platform to showcase their latest advancements and community contributions.

AI4Life’s impact began at the organizational level, with the AI4Life scientific coordinators Florian Jug and Anna Kreshuk serving on the scientific organizers committee. The conference also welcomed Ricardo Henriques from Instituto Gulbenkian de Ciência (IGC) – University College London (UCL) as an invited speaker, highlighting AI4Life’s expertise in superresolution microscopy.

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Hands-on learning with specialised workshops

A series of workshops allowed participants to dive into AI4Life’s practical tools and methods:

  • Building Your Own Chatbot for BioImage Analysis: Opening the series on Wednesday.
  • Accelerating Microscopy Image Annotation with SAMJ Annotator and DL4MicEverywhere: Making your deep learning pipelines flexible, shareable, and reproducible workshops on Thursday, enhancing image annotation speed and flexibility.
  • Friday’s sessions included 4 workshops on BiaPy: deep learning based Bioimage Analysis for all audiences, Recent Advances in ilastik, AI4Life: Empowering BioImaging through the BioEngine, and an Introduction to AI4Life and the BioImage Model Zoo
Poster presentations

AI4Life partners presented two posters:
BioImage.IO Chatbot: A community-driven AI assistant advancing integrative computational Bioimaging, presented on Wednesday.
Building Foundations for AI-Driven Bioimage Analysis: Discussing infrastructure and annotation platforms critical for bioimage analysis, shared on Thursday. 

 

We look forward to the next I2K and are excited to contribute further to this inspiring community!

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Summary of the AI4Life 3rd General Assembly

Summary of the AI4Life 3rd General Assembly

by Beatriz Serrano-Solano

The AI4Life 3rd General Assembly, held at Human Technopole in Milan on October 21-22, 2024, brought together project partners and collaborators to discuss advancements, challenges, and future directions in AI-driven image analysis.

Key Highlights

The event started with the welcoming remarks by Dorothea Dörr (AI4Life Project Manager) and John Eriksson (Euro-BioImaging Director General and coordinator of the project), followed by an introductory reflection on AI4Life’s achievements over the past two years by Anna Kreshuk and Florian Jug, scientific coordinators of the project.

 
Session 1 – AI4Life services

The first session focused on demonstrations for creating, uploading, and consuming models.
* Demo 1: Showcased how users can create and upload models via a web interface or programmatically through an API.
* Demo 2: Demonstrated model consumption from bioimage.io, community partner tools, and code environments.
* Demo 3: Emphasized the importance of FAIR principles, highlighting AI-ready datasets, FAIR models, and documentation enhancements.

Session 2 – Work Package updates

Work package leads updated the attendees on infrastructure and user services, with WP6 announcing that AI4Life’s 3rd Open Call will be launched soon.

Session 3 – Additional Work Package Presentations

Presentations from WPs 1, 3, 5, and 7 covering project coordination, direct support, data standards, and outreach.

Research Infrastructure Updates

Brief updates from the partner Research Infrastructures: INSTRUCT-ERIC, EU-OPENSCREEN ERIC, EMPHASIS, and EMBRC-ERIC.

Session 4 – Planning the Future

A forward-looking session exploring upcoming project collaborations with BigPicture and AI4EOSC, along with a panel discussion on project sustainability and post-project impact.


The assembly concluded with plans for year three’s demos, events, and outreach initiatives, with final remarks from Anna Kreshuk and Florian Jug.

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AI4Life in Chemical & Engineering News

AI4Life in Chemical & Engineering News

by Beatriz Serrano-Solano

In October 2024, Chemical & Engineering News explored how artificial intelligence is revolutionizing microscopy and featured AI4Life’s role in bridging the gap between life scientists and AI experts. AI4Life was recognized for making advanced AI tools more accessible to researchers, supporting their diverse needs, and fostering collaboration across disciplines.

Read the full article here.